MANGO multi-case term bar plot (term-level)
Source:R/MANGO_TERM_barPLOT_forMULTI.R
MANGO_TERM_barPLOT_forMULTI.RdDraw a bar plot of GO terms within a selected MANGO tree for multi-case results.
The function supports three modes via status: "common", "specific", and "DA".
Bars represent the term score (tscore-like), dashed segments/points encode gene distribution ratio
and median fold-change of genes in each term (as implemented in the original logic).
Usage
MANGO_TERM_barPLOT_forMULTI(
filepath,
DEG_list_name,
status,
trends,
LABEL,
condition,
clusternum,
width,
height
)Arguments
- filepath
Directory path containing input files.
- DEG_list_name
DEG list table filename under
filepath.- status
One of
"common","specific","DA".- trends
One of
"UP","DOWN","SIG".- LABEL
Character vector of case labels (used for titles).
- condition
Condition index (used to pick the case/contrast).
- clusternum
Tree(cluster) index to display.
- width
Plot width (used by repr.plot.width option in notebooks).
- height
Plot height (used by repr.plot.height option in notebooks).